PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang0021ss02730.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family ERF
Protein Properties Length: 237aa    MW: 26017.9 Da    PI: 4.8458
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang0021ss02730.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.88.4e-1662112155
                AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                        + y+GVr++   +rWv+e+r+p++   + r++lg++  +e+Aa+a++ a+++l+g
  Vang0021ss02730.1  62 PVYRGVRQRN-GNRWVCEVREPNT---KSRIWLGTYSAPEMAARAHDVAALALKG 112
                        68*****999.9******999833...5************************987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.4E-1162112IPR001471AP2/ERF domain
SuperFamilySSF541714.38E-1963122IPR016177DNA-binding domain
PROSITE profilePS5103220.75863120IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.7E-2863122IPR001471AP2/ERF domain
SMARTSM003801.1E-2563126IPR001471AP2/ERF domain
PRINTSPR003671.0E-66475IPR001471AP2/ERF domain
CDDcd000188.56E-2864122No hitNo description
PRINTSPR003671.0E-686102IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    Send to blast
MDVTMNNDDY SFSSSPSSTS SQSQLCNPNS PSDNSSFPAQ KPELSSHKRK AGRKKFRETR  60
HPVYRGVRQR NGNRWVCEVR EPNTKSRIWL GTYSAPEMAA RAHDVAALAL KGTSAAFNFP  120
DSVSLLPVAK SSSAADIRAA AAQVSEVFLP ANPSSSFTRV EIETNPCSVE GVVDFAKTVT  180
NVEESNESVF FDEEAVYNMP GLLDSMAEGL LITPPSMKRF DWDEVDCETD LTLWTY*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150400.0AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007150096.11e-126hypothetical protein PHAVU_005G126300g
SwissprotA2WZI47e-58DRE1F_ORYSI; Dehydration-responsive element-binding protein 1F
SwissprotQ8S9Z57e-58DRE1F_ORYSJ; Dehydration-responsive element-binding protein 1F
TrEMBLV7BYH61e-126V7BYH6_PHAVU; Uncharacterized protein
STRINGGLYMA12G30740.21e-102(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24333224
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25490.12e-41C-repeat/DRE binding factor 1